No Floaties Required aka Mammal Profile Vol. 3: The Marsh Rice Rat

Despite Hurricane Sandy's best efforts, Eastern Shore of Virginia has survived the strong winds and the high waters. Power was only lost temporarily, and the flooding was minimal. To many this may be surprising, but the Virginian section of the Delmarva Peninsula still has many of its natural fortifications. Almost all of the barrier islands off the coast are wilderness, and there are expansive salt marshes between the shore and the islands--not to mention extensive oyster and shellfish beds. All of these reduce wave motion and act as a shield to hurricanes. This is a fine example of ecosystem services, processes which ecosystems perform that benefit humans.

Compared to Norway rats and black rats (the invasive beast and

the grungy city-dweller, respectively) The marsh rice rat is a rather handsome rodent.

But, the real reason we are here is because we want to learn about the robust, ever-versatile marsh rice rat (Oryzomys palustrus, "Marsh/Swamp Rice Mouse"). As it is semiaquatic, these mid-sized rodents flourish in marshes and the Atlantic coastal plains. Their distribution ranges from Texas through the Southeast and some parts of the Midwest, up to New Jersey.

Marsh, marsh edges, and the surrounding uplands all are likely

places to find this species. Here, my colleague J. Sparks works along

one of the trapping lines. 

As their name suggests, they are bountiful in all types of marshes (saltwater and freshwater), and are able to swim great distances, sometimes holding their breath underwater for long periods of time. The longest I have counted so far is 17 seconds. On the barrier island system they have been reported to swim distances greater than 50 meters across deep channels, no easy feat for an animal that is usually smaller than a soda can. Because they are a truly hardy species, the presence of the marsh rice rat is almost the "100% guarantee" of small mammal trapping on the barrier islands we are surveying. Even on islands that are constantly shifting or are barely an island at all, a rice rat will be present. Thus, they are important players in understanding biogeography, the discipline that tries to understand how populations of species vary and function over different landscapes.

After taking measurements, this guy went on a nice underwater swim and hid in the grasses.

Another rat wanted to demonstrate its swimming abilities for the camera. Given that water

causes rapid temperature loss, it is curious to think about how these rodents survive during

colder months after being submerged. It probably has significant energy consequences.

Marsh rice rats are true omnivores and will generally eat most things they come across: plants, seeds, snails, insects, fiddler crabs, mollusks, and some eggs of marsh-nesting birds. They also are an important food  for marsh hawks, owls, snakes, and mammalian predators such as fox and mink. Thankfully, they are not too much of a hassle for human beings. Because of their habitat preferences, they rarely infringe on human endeavors and become pests.

Unfortunately, these animals are quick, and this is the only natural picture I have been

able to capture. These species are also gutsy, inhabiting grassy dunes and making sprints

across open sand.

Sources
Linzey, D.W. 1998. The Mammals of Virginia. The McDonald & Woodward Publishing Company: Blacksburg, VA.
Moncreif, N.D. and R.D. Dueser. 1994. Island Hoppers. Virginia Explorer 10(4): 14-19.
Webster, WM. D., J.F. Parnell, and W.C. Biggs, Jr. Mammals of the Carolinas, Virginia, and Maryland. The University of North Carolina Press: Chapel Hill, NC.

Mammal Profile Vol. 2: The White-footed Mouse

For those who do small mammal surveys, it is never unusual to get a white-footed mouse (Peromyscus leucopus, "Mouse with White-Footed Boots"). Both the white-footed mouse and its close relative the deer mouse (Peromyscus maniculatus "Agile Mouse with Boots") are the most populous mammals in North America. So, while they might not be the most exotic species to capture, they certainly play an important role in ecosystems.

White-footed mice are skilled climbers, sometimes caching food or making nests in

tree hollows. Here, a mouse avoids be weighed by climbing the Pesola scale.

Interestingly, the white-footed mouse has not colonized many of the barrier islands off the Eastern Shore, with the exception of four islands (Assateague, Wallops, Cedar, and Fishermans; Moncreif and Dueser, 1994). While there is certainly great habitat for them, they have not been documented on any of the other islands. This is surprising, as P. leucopus has great homing abilities and has well documented swimming abilities. It could be that the intercoastal water conditions are too prohibitive.

There is no scientific merit to this picture, except that the mouse looks funny while

trying to bite the Pesola scale so that it can escape. Actually, wriggling and biting, besides their speed,

is their only defense once captured by predators.

White-footed mice have also have become a public issue these days. Whether it is because of a change in predators, climate, or habitat composition, white-footed mice have come under increasing attention due to the higher incidence of Lyme disease and hantavirus--both of which they are carriers of. Even though their higher densities equate to human health concerns, the mice play an important role in linking food webs, as they their omnivorous diets are transferred to larger predators like foxes, bobcats and raptors (many of whom consume large amounts of the rodents). Economically speaking, mice consume large numbers of seeds from weed plants as well as insects and generally avoid cultivated areas. Despite this, the wildlife disease consequences of their current success is a central facet of current research.

This species favors hardwood forests as well as the edges of forests and fields. On the shore, they are found in myrtle shrublands and marshes. While typically not hallmarked for their presence in coastal areas, they also seem to abound in drier mixed hardwood-pine forests.



Sources:
Linzey, D.W. 1998. The Mammals of Virginia. The McDonald & Woodward Publishing Company: Blacksburg, VA.
Moncreif, N.D. and R.D. Dueser. 1994. Island Hoppers. Virginia Explorer 10(4): 14-19.
Webster, WM. D., J.F. Parnell, and W.C. Biggs, Jr. Mammals of the Carolinas, Virginia, and Maryland. The University of North Carolina Press: Chapel Hill, NC.

Mammal Profile Vol. 1: The Least Shrew

Whum chakka um chakka chumchakka whum!
Guosim dig yore paddle deep,
Hurly-burly river wide'n'curly,
There's no time to sleep.
Whum chakka um chakka chumchakka whum!
Rapid wild and fast do go,
Hurly-burly river wide'n'curly,
Bend yore backs an' row.
Whum chakka um chakka chumchakka whum!
Keep her bows up in the foam,
Hurly-burly river wide'n'curly,
Logboat take us home.
Whum chakka um chakka chumchakka ...

-Paddling Song, Guerrilla Union of Shrews In Mossflower, Marlfox by Brian Jacques

I'm not sure if you have read any of the books in the Redwall series by Brian Jacques, but as the main characters are mostly small mammals, you can bet I will shamelessly make references to the series during these mammal profiles (If you haven't heard of the series, it is similar to Watership Down).

So far during our trapping endeavors, we have captured 5 different species of small mammals. One of my favorites, the least shrew (Cryptotis parva, Greek and Latin for "small hidden-ear" shrew), is the first animal I'm going to discuss. The least shrew is in the diverse and complicated order Insectivora (insect-eating and carnivorous mammals). Within that order, they are classified in the Soricidae (shrew) family, a group containing some of the smallest mammals. Characterized by their small eyes, pointed teeth, and long tapered snout, this species relies mostly on its sense of smell and hearing to move and locate prey.

Least shrews are very vocal, using clicks and squeaks to communicate.

In this case, they are mostly communicating, "Stop weighing me and let me go."

The mammals are very small, growing up to 92 mm in length--including tail--and weighing up to 5.7 grams, the weight of a nickel. Although small, they are voracious eaters and busy critters. They are almost always active and only have short periods of rest. Part of this arises from an incredible metabolism: having to eat 50% of their weight or more every 24 hours. The least shrew consumes large amounts of arthropods, worms, and other insects. For some insects that are too large to consume whole, the shrew will eat out the insides. They also are a food source for many other animals, including snakes, raptors, foxes, and skunks.

While the least shrew is often confused with members of the short-tailed shrew genus (Blarina), the least shrew is distinguishable by its tail, which is less than half the length of its body and head. Behaviorally, the least shrew also is rather social, as nests can have up to two dozen individuals. These nests are usually found near logs, rocks, and debris, and they are made out of shredded grass and leaves.

 Unfortunately, due to their energetics, it is not rare to have shrew mortality.
Sometimes the shrew cannot survive the time in the trap, but all possible measures are taken to avoid it.

The old-field habitat in which we surveyed and found the majority

of our least shrews.

The least shrew is mostly found in dry, open grasslands, but they also are found in saltwater marshes.  Typically, the Sherman live trap is not the best method to capture shrews, but we set the trap's trigger to close at a lighter weight.

Sources:

Linzey, D.W. 1998. The Mammals of Virginia. The McDonald & Woodward Publishing Company: Blacksburg, VA.

Webster, WM. D., J.F. Parnell, and W.C. Biggs, Jr. Mammals of the Carolinas, Virginia, and Maryland. The University of  North Carolina Press: Chapel Hill, NC.

Schemnitz, S.D., 2005. Capturing and Handling Wild Animals. In C. Braun (Ed.).Techniques for Wildlife Investigations and  Management (pp.239-285). Sixth Edition. The Wildlife Society: Bethesda, MD.

Settling Down and Shoring Up

Well, it has taken me a while to write another post, but I am back! My position at the refuge in New Jersey wrapped up nicely, and I have settled into a new job on the Eastern Shore of Virginia.

The Eastern Shore, formally known as the Delmarva Peninsula, has the Chesapeake Bay 

to the West and the Atlantic Ocean to the East. Note the barrier islands. Image from Google Earth.

The project I am working on is part of the Virginia Coastal Reserve Long-term Ecological Research (VCR-LTER) initiative. While this initiative has a variety of components, I am specifically working on small mammal surveys (voles, mice, shrews, rats) with a professor who has researched the shore's ecosystems for many years.

The project will take place across the shore: 2 mainland sites and 19 or so barrier islands. Part of the study will compare small mammal diversity to surveys conducted approximately 20 years ago. Having a benchmark of the species currently found on the islands will also provide good reference for similar studies conducted in the future. The barrier islands provide many ecosystems services, and they are rapidly changing in habitat composition and size. Thus, the small mammal work will help in understanding the biogeography and ecology of the greater barrier island ecosystem.

My colleague, J. Sparks, working on reinforcing trap boxes, attaching straps,

and soon to be waterproofing them. Each box holds 32 folded traps.

Before trapping can occur though, the equipment had to get arranged. As some sites will have upwards of 200 traps, solid preparation is key. The type of traps used are collapsible Sherman live-traps, which are are effective at capturing small mammals and also are a survey method that have relatively high capture rates.

Getting everything together involves preparing trap boxes to carry them in, cleaning the traps, making sure all parts of the traps function, and creating the baits for the traps. Normally, baits for these traps are peanut butter and a grain (like rolled oats); however, our trap baits are a combination of shortening (Crisco) and cracked corn, both of which are easy to digest by the animals and also reduce trap mortality during cold temperatures.

Extra baits will be used for trick-or-treaters on Halloween.

They look close enough to candy. Just kidding.

 Using a GPS to mark the beginning of a transect and to

set a bearing. Then the line is laid and flagged.

Before traps are armed and ready for critter abduction, they are laid in transects (lines) that run through multiple habitat types to survey all small species at a location. Traps are then fixed open and baited to attract but not capture the mammals. Once they have acclimated to the presence of the traps (~48 hours) the arming of the traps ensues (and the results of those endeavors will be shared later!). All animals captured are released after measurements are taken.

 The bait is hung inside the trap from the back door, forcing the animal

to walk generously on the treadle which trips the front door. For baiting,

a tongue depressor is used to prevent the closing of the front door.

 Complete with holly and pine-straw landscaping, here is what the

Sherman trap looks like all set up.

On the next post I will begin the first of many species accounts from the animals we capture during the surveys.

Sources
Dueser, R. D., W. C. Brown, G. S. Hogue, C. McCaffrey, S. A. McCuskey, and G. J. Hennessey. 1979. Mammals on the                       Virginia barrier islands. Journal of Mammalogy 60:425-429.
Dueser, R. D. and W. C. Brown. 1980. Ecological correlates of insular rodent diversity. Ecology 61:50-56.
Schemnitz, S.D., 2005. Capturing and Handling Wild Animals. In C. Braun (Ed.).Techniques for Wildlife                                                 Investigations and Management (pp.239-285). Sixth Edition. The Wildlife Society: Bethesda, MD.

A Stick in the Mud

            In 1973, the Endangered Species Act (ESA) was passed by the Nixon administration in order to protect rare and declining wildlife across the country. Without this legislation, many species would undoubtedly be in more trouble than they already are. Since its passing, 28 species have been delisted due to recovery, including the bald eagle, the grizzly bear, and the american alligator (USFWS, Delisting Report, 2012.

As the bane of developers, the ESA stipulates that there cannot be any actions taken to harm populations of threatened (T) or endangered species (E)—threatened meaning is likely to become endangered, endangered meaning in danger of extinction—or the ecosystems in which they reside. It is a rather involved process to get a species listed under federal protection via the US Fish and Wildlife or NOAA, but once protected, there are serious consequences for harming a T&E species.

An adult bog turtle with the mud rinsed off. Notice the orange cheeks.                  

            A current threatened species that I have gotten to work with is the bog turtle (Gleptemys muhlenbergii “Muhlenberg’s Carved Turtle”), which has separate populations in the Southern Appalachian Mountains and the Northeast. Occupying bogs, swamps, and wet meadows, the bog turtle requires slow-flowing rivulets and mucky, organic soil. Their habitat has some of the richest plant diversity, with small bogs or wetlands having over 150 plant species. Because of their habitat requirements, this species has declined as wetlands have been drained, cultivated, and developed.

      A bog turtle nest (above) is usually laid right in the middle of a tussock sedge, so that it can incubate.      

Between predators, weather, and other factors, only about 27% of eggs make it to hatchlings (below).

             Considering bog turtle habitat, it is no wonder the species are declining. Walking through the bogs, one can sink two feet into muck while trying to avoid poison sumac. Surveying for turtles can involve trapping with wire boxes, or, more commonly, probing in the mud. You would never guess that poking around in deep mud will yield turtles. The trick is learning to discern the “thud” of hitting a submerged root from the “thwok” of a rock from the hollow “thunk” of hitting a bog turtle carapace.

Imagine trying to hit that shell through a foot of mud without knowing what exactly you

are hitting. A sometimes frustrating, but rewarding, treasure hunt.

            Once found, the turtles are notched, measured and released so that the overall population can be estimated with mark recapture analysis. If a turtle is lucky, it will get decked out with a radio transmitter. I can’t decide if the transmitter is poorly respected (like a dog with a head-cone), or highly prized (like a geek with the newest gadget). Anyways, tracking and recording the locations of the turtles using radio telemetry help scientists understand how much habitat is required to sustain a population and what type of sub-habitat, or microhabitat, the individuals prefer.

An adult bog turtle with a radio transmitter attached to the carapace.

The transmitter is placed on the side of the posterior so that it does not hinder movement or mating.

            All in all, the bog turtle is a very neat species, burrowing and moving around underneath mud and adding a little character to a rare and unique habitat.


Information on bog turtles taken from studies reported in Turtles of theUnited States and Canada by Ernst and Lovich

On the Road Again

(Disclaimer, if you don't like animal guts, skip this post).

Also, double post this weekend, so don't miss “Quoth the Marsh”

Most normal people would not consider any road kill all that special, particularly if it is a snake. Even though I am human, I most likely wouldn't fit the bill for being normal. Naturally, when I saw a Eastern Common Garter Snake (Thamnophis sirtalis sirtalis) dead on the road, I had to pull over and snag it.

 The specimen in question. Depending on the subspecies,

it can take two the three years before females can reach reproductive maturity

Now, even further from being normal, I decided to dissect the snake so that I could try and get a whole snake skeleton to put together as a model. It was also a unique opportunity because she was gravid, and you could feel the embryos in her gut.

Common Garters are not having too hard of a time compared to most snakes, but it is still sad to see a gravid female killed by a car. There were a total of five embryos inside her. Garters are ovoviviparous, meaning that they produce offspring within an amniotic sac and give live birth. It takes 80 to 90 days for gestation to occur (depending on environmental temperature), and a female can birth between 1 and 101 offspring depending on size and maturity. Females will only breed bi-annually or tri-annually. 

One of five embryos inside the snake. It's rare to get to see offspring

mid-development. The top picture shows the developing snake inside its own membrane.

The second shows it outside of the membrane.

Interestingly, the Common Garter snake is the northernmost snake species in North America. This is because it can tolerate a wide range of temperatures and can even survive being frozen for brief periods of time. Found in a variety of different habitats, the snake is most commonly found near wet areas. As there are many subspecies of this snake, coloration, diet, and behavior can vary drastically.

The Common Garter Snake is also the most deeply studied snake in North America.

For more info, see Snakes of the United States and Canada by Ernst and Ernst

Quoth the Marsh

As the main research branch of the United States government, the US Geological Survey (USGS) does a lot more than look at rocks. They produce many of the research protocols that the National Wildlife Refuge system follow, and this includes the monitoring of many different taxa: streamside salamanders, vernal pool amphibians (see post), songs birds, waterfowl, and many more.

These guidelines for wildlife monitoring mean that nationwide, there are standardized surveys going on, giving the USGS significant insight as to how wildlife populations and species distributions are changing. One of the surveys that we have conducted as part of these protocols include “Secretive Marsh Bird” surveys.

Walking to the first marsh for surveying. Multiple marsh locations are done within

a 4-5 hour window of time during specific weeks of the year.

Like many bird surveys, early morning hours are required, and in this case, they are required along with a portable speaker system. Many of the birds that are obligate marsh birds—meaning they are only found in marshes—are extremely hard to see. In order to survey for them, we play a sequence of bird calls with hopes that these birds will return the call. As with many birds, secretive marsh birds are territorial. Thus, they think the call we play is an obnoxious intruder, and it is their duty to let the intruder know that turf (or surf?) is already taken.

 Clapper Rail. Photo by L. Meyers

 Green Heron. Photo by M. Godwin.

Some of the species that are targeted include the Least Bittern, American Bittern, Sora, Green Heron, Virginia Rail, and Moorhens, and Clappers. While many people think of Great Blue Herons when they think of marsh birds, Great Blues are not considered obligate marsh species, as the herons can be found along streams and other habitats as well.

Least Bittern. Photo by 50birds.com